2020 - Means, S., Ali, M. A., Ho, H., & Heffernan, J. Mathematical Modeling for Hepatitis B Virus: Would Spatial Effects Play a Role and How to Model It? Frontiers in physiology, 11, 146. https://doi.org/10.3389/fphys.2020.00146

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2018 - Ali M. A., Eberl H. J., Sudarsan R. Numerical Solution of a Degenerate, Diffusion Reaction Based Biofilm Growth Model on Structured Non-Orthogonal Grids, Commun. Comput. Phys., 24(3), 695-741 https://doi.org/10.4208/cicp.OA-2017-0165

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2018 - Ali M.A., Eberl H.J., Sudarsan R. A Simulation Study of the Effect of Meso-Scopic Sinusoidal Surface Roughness on Biofilm Growth. In: Kilgour D., Kunze H., Makarov R., Melnik R., Wang X. (eds) Recent Advances in Mathematical and Statistical Methods. AMMCS 2017. Springer Proceedings in Mathematics & Statistics, vol 259. http://doi-org-443.webvpn.fjmu.edu.cn/10.1007/978-3-319-99719-3_29

​Thesis

PhD -  Numerical Solution of a Single-Species Biofilm Model on Non-orthogonal Grids , atrium.lib.uoguelph.ca, https://atrium.lib.uoguelph.ca/xmlui/handle/10214/13040

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MS - Simulation of Flow past the Swift Wing,

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Manuscripts in Preparation

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​Md Afsar Ali., Harvey Ho., Shaw Mean & Jane Heffernan. A single-cell HBV model for viral dynamics in the Liver: Global sensitivity analysis approach, Submitted to Journal of Mathematical Biology.

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Ali M. A., Mahmuda Ruma, Christopher Chow ... & Jane Heffernan. Epidemic trends for a new corona virus under effective control measures: An Anylgic Modeling approach
 

Ali M. A., et.al. Multi-patch model on COVID-19 transmission in a theme park scenario

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Ali M. A. & Jane Heffernan. Age and Phase Structured Model for Malaria Parasite Replication Dynamic in the Human Blood and a Potential Control Strategy of Malaria.

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Ali M. A., Harvey Ho., Shaw Mean & Jane Heffernan. Spatial HBV Model - Expansion of Prior Representative Sinusoidal Model to Investigate the Role of Cytokine Interferon in the Innate Immune Response.

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